Banner

GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
ACC cis rs2273 1 rs2273 chr4:76889388 NAAA chr4:76831809-76862166:- 0.52 5.3 2.4E-6 Longevity
ACC cis rs1148186 1 rs2447629 chr10:28614384 MPP7 chr10:28339923-28591995:- -0.48 -5.05 5.74E-6 Pulmonary function decline
ACC cis rs2273 1 rs4282209 chr4:76919536 NAAA chr4:76831809-76862166:- -0.55 -5.45 1.39E-6 Longevity
ACC cis rs4660306 1 rs4660306 chr1:45978675 CCDC163P chr1:45960581-45965646:- 0.6 5.3 2.36E-6 Homocysteine levels
ACC cis rs2273 1 rs4859413 chr4:76898250 NAAA chr4:76831809-76862166:- 0.53 5.52 1.08E-6 Longevity
ACC cis rs2273 1 rs4859581 chr4:76906974 NAAA chr4:76831809-76862166:- -0.51 -5.24 2.93E-6 Longevity
ACC cis rs2273 1 rs4859582 chr4:76907213 NAAA chr4:76831809-76862166:- -0.53 -5.25 2.86E-6 Longevity
ACC cis rs4869313 1 rs4869313 chr5:96223880 ERAP2 chr5:96211644-96255398:+ -0.99 -12.08 1.04E-16 Pediatric autoimmune diseases
ACC cis rs2273 1 rs6532078 chr4:76920809 NAAA chr4:76831809-76862166:- -0.55 -5.45 1.39E-6 Longevity
ACC cis rs2273 1 rs6827617 chr4:76916146 NAAA chr4:76831809-76862166:- -0.55 -5.45 1.39E-6 Longevity
ACC cis rs7017914 1 rs7007450 chr8:71640269 XKR9 chr8:71581600-71648176:+ 0.71 6.74 1.29E-8 Bone mineral density
ACC cis rs7017914 1 rs7017914 chr8:71591203 XKR9 chr8:71581600-71648176:+ 0.68 6.86 8.24E-9 Bone mineral density
ACC cis rs2273 1 rs7436021 chr4:76905472 NAAA chr4:76831809-76862166:- -0.53 -5.23 3.1E-6 Longevity
ACC cis rs7705093 1 rs7705093 chr5:96290647 ERAP2 chr5:96211644-96255398:+ 0.96 10.53 1.7E-14 Birdshot chorioretinopathy
ACC cis rs1148186 1 rs915209 chr10:28612397 MPP7 chr10:28339923-28591995:- -0.48 -5.05 5.74E-6 Pulmonary function decline